Well done on getting those parts organised, I have two D4400 motors here in Australia with the old liners out and new one's waiting to go in along with new piston rings and reconditioned heads, hopefully in the next few weeks I get it done, I agree that it is surprising what parts are still available off the shelf from the Cat Dealer including the gaskets, I also agree Florin Tractor and Gemdozer are great to deal with.
There is an official Cat Inc valve head protrusion chart for those Cat heads to check the valves sit high enough in the valve seats for maximum compression though if you are working with all new valves and the seats haven't been cut hard I assume you will be OK, when I took my motors apart I was shocked at how bad the liners, rings and valves looked considering how well the engines ran though they were hard to start when cold.
Look forward to seeing photo's of the finished motor.
Mike